BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B05SP1|AL429167
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1334 883 0.0
3x_Contig198 548 e-156
>3x_Contig1334
Length = 7302
Score = 883 bits (445), Expect = 0.0
Identities = 460/463 (99%), Gaps = 2/463 (0%)
Strand = Plus / Minus
Query: 373 cccggtcctgacggctccttacaatcaacttccctcgttgtgccacatttggctggtatc 432
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7302 cccggtcctgacggctccttacaatcaacttccctcgt-gtgccacatttggctggtatc 7244
Query: 433 gaggatcctttaccggaaactacaccggaacaagtggatgtactcattgctggtaccggg 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7243 gaggatcctttaccggaaactacaccggaacaagtggatgtactcattgctggtaccggg 7184
Query: 493 ttgattgaaagtattctatctgcttctttagcatggcagggatccaccgttttgcatata 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7183 ttgattgaaagtattctatctgcttctttagcatggcagggatccaccgttttgcatata 7124
Query: 553 gattccaataactattatggggacacatgggctacaatgacaattgatcagttgaagaat 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7123 gattccaataactattatggggacacatgggctacaatgacaattgatcagttgaagaat 7064
Query: 613 tggacaaatcaagtgaatgaagactcagacgaaacacggttttacaaagatgccagactc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7063 tggacaaatcaagtgaatgaagactcagacgaaacacggttttacaaagatgccagactc 7004
Query: 673 tatgtctccgggttggtagctcaggggaaattcaaatccaagaattttggtattgattta 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7003 tatgtctccgggttggtagctcaggggaaattcaaatccaagaattttggtattgattta 6944
Query: 733 agtcccaagattctatttgcacaatccgatctactctcagttctaattaaatcaagagta 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6943 agtcccaagattctatttgcacaatccgatctactctcagttctaattaaatcaagagta 6884
Query: 793 catcagtattttggagttccaatcgttatccaacttccmtacc 835
|||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 6883 catcagta-tttggagttccaatcgttatccaacttccatacc 6842
>3x_Contig198
Length = 1143
Score = 548 bits (276), Expect = e-156
Identities = 276/276 (100%)
Strand = Plus / Minus
Query: 1 gatcgaaagagtgctgtttttgtcattctttgagcgatattggcggttgagaattttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gatcgaaagagtgctgtttttgtcattctttgagcgatattggcggttgagaattttttt 228
Query: 61 ttggttcttgcaaaccgctcaaaattaggctttacagaattcctaataacattacaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ttggttcttgcaaaccgctcaaaattaggctttacagaattcctaataacattacaggaa 168
Query: 121 cctgtgaataatctcattactagtaaaattccaacctctgaaccgtatcaggctattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cctgtgaataatctcattactagtaaaattccaacctctgaaccgtatcaggctattttt 108
Query: 181 ggaatttctaaggtcgttcatatctgactttttgttctctcgcttttcccttaaagagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ggaatttctaaggtcgttcatatctgactttttgttctctcgcttttcccttaaagagac 48
Query: 241 ataagaactggttatagaataagctatatttaatct 276
||||||||||||||||||||||||||||||||||||
Sbjct: 47 ataagaactggttatagaataagctatatttaatct 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6651
Number of Sequences: 1807
Number of extensions: 6651
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 2
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)